Remembering that the Pyruvate dehydrogenase complex and the alpha ketoglugarate complex catalyze similar reactions, please match the following terms with its description:Dihydrolipoyl dehydrogenase (E3)1) an alpha-keto acid that undergoes oxidative decarboxylation2) is analogous to the pyruvate dehydrogenase reaction in which there's an oxidative decarboxylation with a concomitant formation of an acyl-CoA thioester3) is analogous to the pyruvate dehydrogenase reaction and the isocitrate dehydrogenase reaction in which there's an oxidative decarboxylation with a concomitant formation of an acyl-CoAthioester4) catalyzes the oxidative decarboxylation of alpha ketoglutarate5) regenerates active dihydrolipoyl transacetylase (E2)6) catalyzes the oxidative decarboxylation of succinyl coa7) catalyzes the oxidative decarboxylation of alpha isocitrate8) catalyzes the formation of Succinyl CoAAlpha ketoglutarateThe alpha ketoglutarate dehydrogenasecomplexAlpha ketoglutarate dehydrogenase (E1)Dihydrolipoyl transacetylase (E2)

Pyruvate is the end product of glycolysis. Under aerobic conditions, pyruvate is oxidised into…

Answered: Remembering that the Pyruvate…

Biochemistry

6th Edition

ISBN:9781305577206

Author:Reginald H. Garrett, Charles M. Grisham

Publisher:Reginald H. Garrett, Charles M. Grisham

Chapter23: Fatty Acid Catabolism

Section: Chapter Questions

Problem 16P: Extending the Mechanism of Methylmalonyl-CoA Mutase to Similar Reactions Based on the mechanism for...

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The same E1-Ez-E3 multienzyme structure found in the pyruvate dehydro- genase and the a-ketoglutarate dehydrogenase complexes is also used in the branched-chain a-ketoacid dehydrogenase complex, which participates in the catabolism of branched chain amino acids. Draw the reaction product when the following substrate is acted on by the branched chain a-keto acid dehydrogenase complex. H,C -C-COo- H,C
(a) The pyruvate dehydrogenase complex and the a-ketoglutarate dehydrogenase complex have common reaction mechanisms and catalyze chemically similar reactions. However, there are two enzymes that are critical for regulating the pyruvate dehydrogenase complex that are not found in the a-ketoglutarate complex dehydrogenase. What are these regulatory proteins and what is the re-sult of their catalytic action? (b) Through the metabolism of pyruvate and of isocitrate, CO2 is released with production of NADH. One of these metabolites undergoes oxidative decarboxylation while the other undergoes non- oxidative decarboxylation. On the basis of the structures of the reactant and product for both metabolites show why one reaction is oxidative while the other is non-oxidative even though NAD+ is reduced in both cases. (c) Using structural formulas for the reactions catalyzed by the pyruvate dehydrogenase complex, draw the structures of the corresponding intermediates of the reaction cata-lyzed by…
The mechanism for the conversion from alpha kytoglutarate into succinyl CoA by alpha-ketoglutare dehydrogenase is analogous to the pyruvate dehydrogenase mechanism. Draw and show the major intermediates and arrow pushing for the enzyme-catalyze process for the conversion of alpha-ketoglutarate to succinyl CoA. Note: the carbanion of thiamine pyrophosphate nucleophillically attacks C-2 of the alpha-ketoglutarate, i.e., the carbonyl carbon of that substrate.
Briefly describe the biological rationale for each of the following allosteric phenomena: (a) activation of pyruvate carboxylase by acetyl-CoA; (b) activation of pyruvate dehydrogenase kinase by NADH; (c) inhibition of isocitrate dehydrogenase by NADH; (d) activation of isocitrate dehydrogenase by ADP; (e) inhibition of α-ketoglutarate dehydrogenase by succinyl-CoA; (f) activation of pyruvate dehydrogenase phosphatase by Ca2 +.
What are the similarities and differences between the reactions catalyzed by pyruvate dehydrogenase and a-ketoglutarate dehydrogenase?
Arsenate (HAsO42-) can replace inorganic phosphate (Pi) in the reaction catalyzed by glyceraldehyde 3-phosphate dehydrogenase, causing Glyceraldehyde 3-phosphate to be directly converted to 3-phosphoglycerate (NADH is still formed). If a cell is expose to Arsenate, which of the following metabolites of glycolysis will not be detectable in the cell? 2-phosphoglycerate 3-phosphoglycerate Fructose 6-phosphate Glucose 6-phosphate 1,3-bisphosphoglycerate
Compare and contrast Pyruvate Dehydrogenase with a-ketoglutarate dehydrogenaseOutline the mechanisms of both enzymes. Discuss the functions of the coenzymes. List the similarities and the differences between the 2 enzymes. Both are very large membrane bound complexes. What are the advantages of this strategy?How detailed is the enzyme structure known below(It's Pyruvate Dehydrogenase )? What insight(s) does this structural detail give you about the enzyme mechanism.
Arsenate (HASO42-) can replace inorganic phosphate (Pi) in the reaction catalyzed by glyceraldehyde 3-phosphate dehydrogenase, causing Glyceraldehyde 3-phosphate to be directly converted to 3-phosphoglycerate (NADH is still formed). If a cell is expose to Arsenate, which of the following metabolites of glycolysis will not be detectable in the cell? 2-phosphoglycerate B 3-phosphoglycerate Fructose 6-phosphate Glucose 6-phosphate E 1,3-bisphosphoglycerate
The oxidation of glyceraldehyde 3-phosphate to 1,3-bisphosphoglycerate by glyceraldehyde 3-phosphate dehydrogenase has an unfavourable equilibrium constant (K'eq= 0.08; G′° = 6.3 kJ/mol), yet the flow at this point in the glycolytic pathway is smooth. How does the cell get out of the unfavourable equilibrium?
Catalytic mechanism of the Pyruvate Dehydrogenase Complex Match the following coenzymes with the type of reaction or catalytic steps they are associated with during the catalysis of Pyruvate transformation into Acetyl-CoA by the Pyruvate Dehydrogenase Complex: NAD+ V [Choose] formation of a low energy thioester bond decarboxylation TPP oxidation/reduction formation of a high energy thioester bond Coenzyme A [ Choose ] Lipoyl Lysine [ Choose ] FAD [ Choose ]
Outline the mechanism of the conversion of a-ketoglutarate to succinylCoA catalyzed by α-ketoglutarate dehydrogenase complex. Include all products, coenzymes, and reactions in your discussion.
Describe in detail the structure of the pyruvate dehydrogenase complex.

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