Aminolevulinate (ALA) synthase is a pyridoxal phosphate containing enzyme displaying a non-sequential (ping-pong) enzyme mechanism. It catalyses the reaction: glycine + succinyl-CoA ⇌ aminolevulinate + CO2 Draw a Cleland diagram (diagram illustrating when the substrates and products form an enzyme substrate complex) for this reaction if glycine is the first substrate to bind.
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- Fatty acids are converted to their coenzyme A esters in a reversible reaction catalyzed by acyl-CoA synthetase: R-COO +ATP +COA R-C-COA +AMP + PPi a) The reaction involves two steps the first of which forms an enzyme-bound intermediate identified as the mixed anhydride of the fatty acid and AMP: R-C-O-P-O-nibose-adenine Write two chemical equations coresponding to the two steps of the reaction catalyzed by the synthetase. b) The acyl-CoA synthetase reaction as written above is readily reversible. How might the reaction be made to favor formation of fatty acyl-CoA? Write within the box. Anything outside the box will not be graded. From theA biological Claisen reaction occurs in the conversion of two acetyl CoA molecules to one acetoacetyl CoA. Analyze each step of the incomplete mechanism and add the missing curved arrows. The base is abbreviated as B: in the mechanism.Aminolevulinate (ALA) synthase is a pyridoxal phosphate containing enzyme displaying a non-sequential (ping-pong) enzyme mechanism. It catalyses the reaction: glycine + succinyl-CoA ⇌ aminolevulinate + CO2 (A) Sketch the Lineweaver Burke plots for ALA synthase varying glycine at three (3) different fixed concentrations of succinyl-CoA. Label the axes and the lines, and explain in words what you expect to see for these three lines. (B) Draw a Cleland diagram (diagram illustrating when the substrates and products form an enzyme substrate complex) for this reaction if glycine is the first substrate to bind.
- Which of the following is most helpful in ensuring that wasteful (unproductive) hydrolysis of acetyl CoA does not occur in the reaction catalyzed by citrate synthase? Group of answer choices Citrate synthase is a tetramer Induced fit ensures oxaloacetate binds before acetyl CoA 3 molecules of oxaloacetate bind for every 1 molecule of acetyl CoA Citrate inhibits the reaction Which of the following catalyzes a step that does NOT produce CO2? Group of answer choices alpha-ketoglutarate dehydrogenase complex malate dehydrogenase pyruvate dehydrogenase complex isocitrate dehydrogenase Citrate synthase is regulated by... Group of answer choices Concentrations of substrate and products Fructose-2,6-Bisphosphate Covalent modification Allosteric regulation by the levels of NADDHThe pyruvate dehydrogenase complex catalyzes the oxidative decarboxylation of pyruvate to form acetyl‑CoA. E1E1 , E2E2 , and E3E3 are abbreviations for the enzymes of the complex. Classify the enzyme names, prosthetic groups, and reactions as E1E1 , E2E2 , or E3E3 .Peroxisomes have an alternative pathway for oxidizing polyunsaturated fatty acids. They contain a hydratase that converts D-3-hydroxyacyl CoA into trans Δ²- enoyl CoA. How can this enzyme be used to oxidize CoAs containing a cis double bond at an evennumbered carbon atom (e.g., the cis-Δ¹² double bond of linoleate)?
- Show the structure of each intermediate in the conversion of b-hydroxybutyryl-ACP to butyryl-ACP by the fatty acid synthetase complex. Show where cofactors participate. In your first intermediate, circle the carbon atoms derived from malonyl-CoA.Hexokinase catalyzes the first step of glycolysis, in which glucose is phosphorylated to form glucose‑6‑phosphate. Give two reasons why a Mg2+ cation is required to facilitate this reaction.Behenate (C22H44O2) can be obtained by chain elongation from palmitate. How many ATP equivalents are produced in the degradation of behenate to eleven acetyl-CoA?
- In Bacillus subtilis, threonine is metabolized by the following sequence of reactions: (a) oxidation; (b) decarboxylation;(c) transamination; and (d) oxidation to produce pyruvate. Outline this sequence of steps, show the structures of thesubstances, use abbreviations for the cofactors, and show any enzyme-bound coenzymes. What type of enzyme bound intermediate is likely for reaction (d)?Draw the structures of the following coenzyme molecules: 1. CoA-SH/Acetyl-S-CoA 2. NAD*/NADH + H* • For both: Give full name (if you copy the formula from an Internet source, please cite it properly, for example, according to the Chicago Manual of Style. • Indicate what are the chemical groups that are active in these molecules, i.e., what group participates in metabolic reactions (be aware that both molecules may be involved in both anabolic and catabolic processes). • What vitamin or vitamins will, when modified, contribute to the structure of these molecules? • Write a short, general conclusion of the importance of these two coenzymes in metabolism.Identify a pathway for utilization of the four carbons of acetoacetate in cholesterol biosynthesis. Carry your pathway as far as the rate-determining reaction in cholesterol biosynthesis. Drag the appropriate labels to their respective targets. succinyl-CoA succinate acetyl-CoA CoA-SH acetoacetyl-CoA HMG-CoA 2NADP 2NADPH+ 2H acetoacetate K UHL return to a mevalonate + CoA-SH